As aerospace systems become more multidisciplinary, conceptual design increasingly depends on coordinated treatment of tightly coupled structural, thermal, aerodynamic, maintenance, and certification considerations. Traditional document-based workflows make this coordination difficult to manage and update consistently. This work presents this workflow using the conceptual design of a commercial nacelle’s Inner Fixed Structure (IFS) as an example, using the Requirements-Functional-Logical-Physical (RFLP) process within a Model-Based Systems Engineering (MBSE) framework implemented in Cameo MagicDraw. The paper develops a baseline IFS digital systems model spanning stakeholder requirements, requirement normalization, activity-based behavior, logical architecture, physical architecture, and cross-layer traceability. The resulting model is hybridization-aware in that it is structured to support early identification of likely change-impact pathways, new interfacing needs, and additional thermal, electrical, and certification considerations associated with future hybridized propulsion concepts. Results demonstrate the baseline model as a technical design document and scalable reference architecture, improving clarity in subsystem definition and supporting a unified representation of multidisciplinary design considerations. The work therefore contributes a subsystem-level, traceability-first MBSE case study and establishes a baseline model prepared for later hybridization-oriented extension.